deleted commented out code
added io functionality and started testing tree insertion/splits, if someone wanted to write a recursive print tree method, that would be awesome, otherwise I'm pretty confident it is working correctly (at least up to about 7 insertions that is)
created readme
fixed search and insert methods in BTree, created a crappy print method, still needs a real inorder traversal print
worked on genebankcreatebtree, all finished except for the file dump part that needs the ability to inorder print the bTree
, took out the debugging from the parser and starting working on the GeneBankeSearch class.
small changes
changes to Parser and Tree to fix offset errors, add inorder traversal print
finish GeneBankCreate and Search, both are working properly. Parser is not woring for files with multiplie sequences.
parser work for mulitple sequence files
make everything work exccept for the cache part of the project
add Cache.java
wire in cache for creation and search
fix parser for gbk files with meta data, but no sequences
add query files for testing
add code comment for all classes except Parser and TreeObject.
add code comments for all classes
pre branch commit
fix cache, maybe break non-cache
fix insertion
Script file for testing added (warning: you will get a lot of dat files)