adds a base case input file for the lumped parameter nuclide model.
Merge branch 'develop' into lumped_base_case
Merge branch 'develop' into lumped_base_case
better inner bc update logic.
non-transport (0 porosity) EM base case works swimmingly.
updated cyder to use new event manager for output. Components now carry a ref to their owning genrepo - this allows namespacing of tables with respect to their individual genrepo instance in cyclues (important for cases of more than one genrepo)
added gitignore for vim swap files
In the middle of something... not a complete commit.
hotfix for extract test. error introduced in commit commit 3b849920cba5112128501f54de71270d8f29902d yesterday.
Merge branch 'develop' into HEAD
changed table title... made temporary table title change in plotting script to accommodate. This should be changed to be flexible according to the generic repository model ID...
changed GenericRepository to Cyder for brevity
more replacement of genericrepository with cyder.
no longer need these in the cyder repo.
Merge branch 'abstract-db' into lumped_base_case
 bus time, created conc_to_comp_map function.
oops, lost genericrepositorytests files in the move... this restores them as
CyderTests...
adds run_dir script
minor changes to output_tools
Merge branch 'develop' into lumped_base_case