Removed spaces from workflow file.
Cleaned initialize.sh
new maverick with heart beat and instant update and modified files
Merge branch 'testing' of github.com:molgenis/molgenis_apps
added a new function that allows users to batch upload the definition of predictors instead of to define one predictor at a time
Merged with pull request
Replaced the JqueryUI modal with BootStrap modal for addingPredictor popup window
add more ontologies for searching terms;Replace the ontologySerivce with BioportalOntologySerivce
replaced the jqueryUI with bootstrap for the table that is used to show the mapping result;removed many unnecessary code (some fancy functions but not useful)
change a hashmap key type. Use measurement_id as the key to access hashmap in stead of measurement_name
changed table height
use id instead of name to access predictorInfo information because there might be illegal character in name therefore when the name is used as the html element id, it might break the page
remove the old HarmonizationPlugin package from project
rewrote the harmonization plugin. Now it allows users to upload variables in batch and match variables with multiple studies at the same time therefore it could save a lot of time
Merge branch 'testing' of https://github.com/molgenis/molgenis_apps
Merge branch 'testing' of https://github.com/molgenis/molgenis_apps-legacy
Added and improved tests for compute4. Beware, the tests may be not fully tested and thus they may be incorrect or unfinished.
Switched of R.
Added table to QC-report template.
Moved templates out of protocols folder into template folder of ngsWorkflowRealignmentAndSnpCalling pipeline.