minor fixes
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
Java 1.7 compatible
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
return queryAtom
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
Modifications to support TaskUpdater object
optimised vf mcs mapping
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
test case
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
single mapping optimised
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
test cases
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
check matches
Signed-off-by:Syed Asad Rahman <s9asad@gmail.com>
Merge branch 'master' of https://github.com/asad/SMSD

Conflicts:
	src/org/openscience/smsd/mcss/MCSS.java
	src/org/openscience/smsd/mcss/MCSSThread.java
Merge branch 'master' of https://github.com/asad/SMSD
Make safe for Java 6