cleaning directory
cleaning data & working directories
Merge branch 'master' of https://github.com/stymy/pipelines

Conflicts:
	src/clustering/clustering/__init__.py~
	src/clustering/clustering/cluster.py~
	src/clustering/clustering/mask_surface.py~
	src/clustering/clustering/mask_volume.py~
	src/clustering/clustering/utils.py~
removing unnecessary files
working preprocessing, and visualization discrete bar
preprocess now runs, but without report
Freesurfer file structure no longer has FREESURFER/
running preprocessing for all subjects
starting clustering
various changes to accomodate nki_enhanced
clusters work, edited directory structure after running out of space
start making labels the same across clustermaps
working standardize_labels.py
fixing similarity matrix bug...tbc
re-running concat node, but -mask_only_targets is opposite. Added exception handling for OSErrors.
mapping to correct vertices
new & improved clustermap conversion
working version. about to fix input & spectral clustering
separated similarity and clustering pipelines
git add new pipelines