A bunch of debugging.  The script runs now although nothing was submitted.  I'm going to submit a test case now and do further debugging.
Fixed typing issue in manage_storage.
Fixed job id bug.  QsubProcess method launch should now return True if sucessful, and the jobid is also recorded.
Error reports for bcbio pipeline should be sent only a single time now.  Also, storage reports for backup are also only sent a single time.