Various changes to make deployment clean
Apply patch to shock on deploy
Fixes to docs
minor modification
Fixed path to shock.pm library and created missing directory
Fixing formatting
Fixing formatting
Renamed libs/ directory to lib/
Files no longer needed
Created start_service and stop_service scripts
Edits to Makefile to conform to KBase standards
Resolved Makefile conflicts in merge
Merge pull request #3 from jaredbischof/master

Minor updates