Don't fail rebuild when header is removed

The *.d depends files for make just list the files used when building an
object file. Removing a file listed in such a dependency file causes make to
search for a way to recreate it. This usually cannot work because these files
aren't autogenerated.

The gcc option -MP can be used to generate empty rule for these files. Removing
a file in a dependency list will then execute this empty rule and continue with
the execution of the creation of the object file. This compilation process will
then automatically correct the dependency file.
Update manpage to use semantic mdoc macros.
Make the manpage match what --help prints out.
Update outdated plugin information.
Use more appropriate lists.
merged heads, made a few man page changes