removed unused blob of code. Fixed typo
Updates to Genotype Aligner
 - use minor allele as backup for low-frequency variants
 - output list of variant id updates
 - lots of typos
 - extended readme
oeps test was commented out
Added test for ma alignment + fixed some tests
exteded readme genotype aligner
Merge pull request #138 from PatrickDeelen/master

Genotype Aligner improvements