Initial version of Fragment Integration

Change-Id: I12d1d33c2f43963d321b21e601607e209bbe525e
Correctly finds the volume.

Change-Id: I674c187be18161da70982a3c01a96b10227f4702
Faster and possibly multiprocess ready.

Change-Id: Ifd683f50de6defbe8a07f1c9a5875527288475e7
Fixed for proper multiprocessing.

Change-Id: Iab173b6aa290b43bc116a59206572635ce06dc8d
Updated FragmentIntegration to look for AMRConnectivity

Change-Id: I125f62ae981be7de7fc1dafcdd8624a19c7e5bd4
Initial non-working version of AMRConnectivity

Change-Id: Ib62ef0b7cc1945ae6b8b62e4c644e8ad811f4f74
Adding the dual grid helper.

Change-Id: I9111e93099049c39485d5230d145d756ea13f829
This version works with single process.

Change-Id: I63f9898070d887d70945e55832f5f70faa8583ea
Parallel connectivity first pass.

Change-Id: I8732e432d8182b534c86c4a34caa110019092985
Moved into its own function for readability.

Change-Id: I3f200361b0c777341509acf741a3a0dcba505c57
removed a pesky semicolon

Change-Id: Iecf30e5940520240205e24cae0e4c724b538b0f9
Fixed communication issues with the exchange.

Change-Id: I7ff101b9927b440a9624108feedb8abf1b9bc944
Resolves distributed equivalences correctly now.

Change-Id: Icb78be346f3656a52033e94afcdc236e48fe66cd
Fixed the communications issues.

Change-Id: Ib4eb36d07d12639bb017f00101ec5cdd7fbe8e6a
Cleaned up the uninitialized locations.

Change-Id: I5472365c14577217ad3729f35e5b0e62f75ad556
Add the ghost level check back in for now.

Doesn't cooperate with contours, but works fine for integration.

Change-Id: I27d8ecd84a5a621d9b41b1091e199db2350860ae
Merge topic 'implement_new_fragment_analysis' into next

199e47f Add the ghost level check back in for now.
e0c969a Cleaned up the uninitialized locations.
1ef1aef Fixed the communications issues.
b20b805 Resolves distributed equivalences correctly now.
a1b58e2 Fixed communication issues with the exchange.
e674bfd removed a pesky semicolon
ac30a94 Moved into its own function for readability.
d497ada Parallel connectivity first pass.
d47e162 This version works with single process.
171e703 Adding the dual grid helper.
606f8ef Initial non-working version of AMRConnectivity
a35aa71 Updated FragmentIntegration to look for AMRConnectivity
22912a4 Fixed for proper multiprocessing.
49efd68 Faster and possibly multiprocess ready.
bca7eea Correctly finds the volume.
a0b3196 Initial version of Fragment Integration