This adds the possibility to specifically convert a subset of Impute2 imputed samples to TriTyper
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Some minor fixes to ImputeToTriTyperConverterV2
Bit more testing sample filter
Some more minor fixes to ImputeToTriTyperConverterV2
Add VCF to TriTyper to ImputationTool console commands
Remove file that should not be in repo
Update .gitignore
Merge branch 'master' of https://github.com/molgenis/systemsgenetics
Throw IllegalStateException when QTL mapping did not yield any results.
Prevent tri-allelic SNPs from being tested in QTL mapper
Update sample filter methods
Update sample filter methods of trityper genotype data
Update autoloader with variant filter and sample filter
some comment
rename of scripts to examples
Added human readable gender.
Merge pull request #58 from PatrickDeelen/master

Updates on sample filters and autoloader with sample and variant filters.
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git