partially changed the evolution part and trying to changing the mutation part
remove the temp files
changed the mutation (not finished)
fix a small problem
partially changed
implementation not finish yet
fix conflicts
The report information is consist of fitness, generation number, genome length, gene num, domain number, protodomain numbers (b,c0,c1,p), rule number, all these are stored in $anc_ref and print into stats_ref?
update
implemented different mutation strategies, YET the domain's and protodomain's duplication and deletion is not implemented... and the recombination is not based on the gene number
Merge branch 'test' of https://github.com/LifeWorks/biojazz into test
previous changes