Deleting these files and replacing with symlinks to
files in cxgn/cxgn-corelib/t/CXGN/Phylo
Seed rng from clock; improved cl arguments.
Initial commit. Read in several files, look at the first
column of each and find which items belong to which set of
files.
symlinks to files in cxgn/cxgn-corelibs/t/CXGN/Phylo
Now shows items in each category (1only, both, 2only)
as well as counts.
Handles *.newicks files with bootstrap trees from nj or ml. Specifies
in its output which of these (ML, NJ, ML_BS, NJ_BS)
handles paralog clade = 0 (e.g.  ltltlt 0 3) correctly, etc.