Exclude some files we only need in the repository from the ZIP files generated by GitHub.
Rename Platform to Framework in DocBlocks and Documentation
Renaming files.

Author:    Ian MacLennan <ianlenmac@gmail.com>
Committer: Ian MacLennan <ianlenmac@gmail.com>
Renaming Classes.
Fixing stuff after move.
Fixing parse error in MysqlQuery and remaining phpDoc errors.
Fixes from class name merge