cleaned up assignLinkageGroups a bit, removed expendable function
Merge branch 'master' of github.com:DannyArends/phenotypes2genotypes
Merge branch 'master' of github.com:DannyArends/phenotypes2genotypes
adjusted stop to check for founders group in population instead of a variable called founders_group, adjusted option names from offspring_pheno to offspringPheno etc..
Merge pull request #49 from Mark-de-Haan/master

Bug in intoPopulation when simulating founders
merge
Adding TODOs