Added portability definitions to common header (mainly inline)
Added -Winline to configurar.sh
Implemented private inline function to recalibrate bam read for efficiency. Leaving public function with error checking
Fixed redeclaration of recalibration_env_t and data_collect_evn in private header recal_structs.h
recal_recalibrate_batch now uses inline recal_recalibrate_alignment_priv function for efficiency
Merge branch 'optimize' into develop