init of code
working pipeline code
added store/restore functions
added fallover and revive code
checking before I change the code radically
almost working code
sync
almost a  woking flow controller + dummies for debugging
small flow bug
working code, with flow and restarting working
Fixed an retained job error, the basic pipeline now works.

If the main program is killed and cannot recieve the job exit
information the program will not fail, but moan a lot. This is
the next step to be fixed.
stats fpr local jobs
fixed darwin/general bugs
objected the hive access and fixed a failed-job bug. Plus nice stats for a run!
debugging/testing the code with real data, getting close now
fixed resubmit bug
fixing teething problems
Merge branch 'dev' of /home/repos/git/easih-pipeline into dev

Conflicts:
	modules/EASIH/JMS.pm
	scripts/bwa_solid_pipeline.pl
merged
does not call the local dummy locally so it can be controlled