Tangram_bam concatenates special references for ssw
Shrink tangram_bam pool; decrease the number of reads for SSW
tangram_bam handles the target region
Erase the alignments that are found by their mates in the target region.
Merge branch 'master' of github.com:jiantao/Tangram
Add TB_VERBOSE_DEBUG for tangram_bam files
Use bam index jumping
Fix the BamRegion setting
Set the RightPosition of BamRegion
Merge branch 'master' of github.com:jiantao/Tangram