Merge pull request #6 from conorbrady/master

Server updates
Fixed application and added frontend after testing
Added body to constructor. Still needs to have imput stream split up
Changed Environment constructor parameters
Merge pull request #7 from soniloi/master

Environment constructor
update to enviromentHandler
Added sleep code for waiting between RTO pings
Updates following meeting
Merge branch 'master' of https://github.com/rogers4815/clockworksDSA.git
RTPResponse now writes received script to a file
Try catch added
I am so sorry about all these commits
Changed to Java 1.6 from java 1.7
Added sleep between sending WOP pings
Added removed new line characters to script
Changes following todays testing and review
Resolved merge conflict