Merge branch 'split_read_sf_fix' into pool_then_call
remove trimming and keep the first bp distribution
Merge branch 'rm_temp_bam' into pool_then_call
update bp with mean position
param bug fix

Signed-off-by: Ryan Layer <ryan.layer@gmail.com>
more broke than not
add norm function
Merge branch 'sr_filter' into pool_then_call

Conflicts:
	src/lumpy/SV_SplitRead.h
find joint pdf
Merge branch 'unmapped_pair_fix' into pool_then_call
rem debug output
bp fix
move to 64 bit int
move out the two hit fix
Merge branch 'pool_then_call' into dev