Allow cycle range by read to be specified on command line
Merge pull request #46 from iainrb/devel

Allow cycle range by read to be specified on command line
Update version to 1.09
Merge pull request #47 from iainrb/devel

Update version to 1.09
Merge pull request #48 from wtsi-npg/devel

Merge in changes from wtsi-npg/devel for version 1.09