First attempt at moving to plain jekyll
First working plain jeykll commit
Fix superscripts and subscripts
Use small in footer
Compile Sass into source directory
Use Pandoc to generate site
Moved greeting into an include
Decisive move from Octopress to plain Jekyll

Lots changed in this commit.
Fix locations for PDFs
Remove unnecessary file
Not using rsync anymore
Added site description to meta tag
Correct validation and missing file errors
Fix navigation links for mobile
Fix code size
Fix unnecesary spaces
Comment out unused scripts for now