[Modules] Cope better with top-level declarations loaded after being declared in the current translation unit <rdar://problem/13189985>.

These two related tweaks to keep the information associated with a
given identifier correct when the identifier has been given some
top-level information (say, a top-level declaration) and more
information is then loaded from a module. The first ensures that an
identifier that was "interesting" before being loaded from an AST is
considered to be different from its on-disk counterpart. Otherwise, we
lose such changes when writing the current translation unit as a
module.

Second, teach the code that injects AST-loaded names into the
identifier chain for name lookup to keep the most recent declaration,
so that we don't end up confusing our declaration chains by having a
different declaration in there.