Fixed RNAalifold command-line bug.
tutorial added (pdf)
Commit 11/22/12
RNAalifold modfications.
USAGE section added to README
Resolved conflict.
Merge commit 'f3b6936919e089a5c5179cf50d7079f9b7c326fd' into structalign
Resolving conflicts.
Merge commit '69b37fc0dbc9e8c168d8d0b4a032b23a3f423434' into structalign
Merge commit 'd48a880519d3e4fa21b5d338b97b796c85fd7561' into structalign
PPFold fix for non-UK/US locales
old bug in the Tamura-Nei substitution model
Resolving conflicts.
fixed the case of StatAlign.jar in README.txt
Resolving conflicts.
Resolving changes to MainFrame.
Resolving conflicts.
Resolving conflicts.
the changelog