Added GetOptions list instructions
Added define-param cdv file
Info about how to place if-block
Corrected bugs
Removed tip to require/separate custom subroutine
Added csv table for ProgramPreRequisites
Formatting
Added fidsubmitjob parameter table
Explained some variables
Column conventions started
* Changed fork-me link
Merge remote-tracking branch 'upstream/develop' into develop
Merge remote-tracking branch 'henrikstranneheim/develop' into develop

Conflicts:
	docs/annotated_file.rst
+ Extended install instructions
* Improved logo
Toned down logo
Removed unnessesary columns
A bunch of small fixes and layout corrections
New logo (serious)
Merge branch 'develop' of https://github.com/robinandeer/MIP_api into robinandeer-develop

Conflicts:
	docs/MIP_overview.rst
	docs/intersectCollect.rst
	docs/pedigree_file.rst
	docs/pedigree_file_optional_columns.csv
	docs/structure.rst