Updated error message
Added faster way to build indexes with an exon list.
Updated to 0.1.3
Updated bgenreads to check reads created.  Update bevalsim to be more dynamic and flexible: reads now do not need to be in any order.
Updated bevalsim
Updated bevalsim
Changed numThreads to index only in bpreprocess
Changed indexLayoutFileName to index creation only in bpreprocess
Changed documentation for bpreprocess
Fixed bmatches.1 whereby the -r was given for inputting reads.
Stricltly enforcing that -x cannot be used with -s, -S, -e, or -E in bpreprocess
Updated bpreprocess man page
Updated documentation of bmatches.  Paired end IS supported.
Updated space in bmatches documentation
Updated man page for bmatches
Changed documentation and command line name in bpostprocess
Update bpostprocess documentation
Updated documentation and naming of the bfast matches reads filtered file.
Fixed bug in naming bfast matches reads filtered file
Adding 0.1.4 to the change log only