Added getAnnotatedDataFrameAssay, renamed is.ms to isMSAssay, added investigation.identifier to ISAtab-class, modified doc
Added study titles, descriptions, contacts and affiliations to the ISAtab-class, added trim method, updated doc
Added methods for microarray assays and NEWS file
Added docs, fixed samples to be a list in MIAME info
Removed old method
added example
Output warning rather than stopping reading the ISAtab dataset
deleting faahKO files, only leaving the zip
Methods for microarray and ms assays, documentation
Documentation
Armstrong study metadata
Added class AssayTab and sub-classes, implemented methods, added affy in DESCRIPTION file
Changed documentation, completed method setAssayTabs
Fixing issues with generic methods, added doc
Added new documentation files
Added new subclasses for AssayTab
Fixes and doc
Added new documentation file and deleted old ones, changes in exports
Completing documentation
Renamed metadata file, completed examples, removed comments