Values kept chaning in tests for pfitmap_release.rb which uses the biosql.
new gem version of capistrano and mime-types
Created failing tests for new taxon model
Migration for adding columns to Taxon
added explanation on how to fill in Taxon table
Test for biosql function that takes in a list of ncbi_taxon_id and returns a list of taxon hierarchies
Can send a list of ncbi_taxon_ids to biosql and receive the hierarchy for all of them
Fetching all ncbi_taxon_ids with one query to biosql
Added columns to enzyme
Added columns for proteins
migration to remove name and rank from protein and name and parent_id from enzyme
migrations to remove columns from taxon
Reverted enzyme table / model changes
Removed migrations for enzyme
few gems updated
changed enzyme model back in dia
My google key seems to have changed! updated user in seed
Reverted enzyme and specs for enzyme
fixed factories for enzyme, taxon, protein etc
taxon updates on model, spec and controller