added constant for treestoreId predicate
Now sorts in descending order because of pre-order labeling of interior nodes
adding mock runner class (should have same interface as mapreduce one)
added functionality for writing branch lengths into paths
Added Apache2 handler
changed to point to config file inside mod_perl sandbox
added output format pulldown
this is still not working the way I want it inside Apache2/mod_perl. the hadoop jar is not being unpacked correctly.
util object is now a singleton. also now ensures to strip branch lengths from tip before doing the md5 hashing
example file of bird names
now correctly prunes out unbranched interior nodes
added option for birdtree
updated config defaults