Merge pull request #2 from erwinwinder/master

getSampleSnpVariants and some changes
Merge pull request #3 from erwinwinder/master

 	Refactored getVariants from callbackhandler to queryresult with iterator
Very small optimalization
Impleted minor allele freq for SNPs. Needs tester
Bug fix in SNP minor allele count
Implemented generic minor allele count

Needs to be tested
Comment update
Minor comment update
Fixed testing under windows with space in path
Upgrade of the handeling of generic variant IDs

All old tests and interfaces remained intact
Also part of last commint about variants IDs
Testers for SNP genetic variant.

All SNP specific methods are being tested. Minor allele could use a few
more cases.
Merge pull request #4 from PatrickDeelen/master

Minor allele, genetic variant ID & testing
Added ped/map files
Merge branch 'master' of https://github.com/molgenis/molgenis-genotype-reader
Moved genetic variant id class to separate package
Updated genetic variant IDs

Test all work.
empty ID with sepecial implementation. Empty list and null for primary
id
Code formating update
Merge pull request #5 from PatrickDeelen/master

Fixed all testing and variant ID update
Merge branch 'master' of https://github.com/molgenis/molgenis-genotype-reader

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