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Merge pull request #8 from shelmscahan/SHC

Sara new file
Added scripts directory

Added scripts directory. Included example R markdown script
'map_plot.Rmd' for plotting points on map of bioclimatic variables.
Update to 'map_plot.Rmd' script.

Added sessionInfo() ===> should do this for ALL SCRIPTS in future.

Added basic layout to make same map using ggplot, but need to figure out how to include MAT
Merge pull request #9 from sediamond/SED

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Merge pull request #7 from demarc10/bbd

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Merge pull request #6 from kmille31/KAM

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Merge pull request #5 from clintpenick/cp

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Merge pull request #3 from gracebarber/GWB

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Merge pull request #2 from amellison17/AME

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Clean up repository. Deleted test files made by contributors at Aphaenofest
Created hierarchy for files in climate-cascade repository.
Added a projects directory that contains a subdirectory for each project within the overall climate-cascade grant.
Within each projects subdirectory are a standard set of subsubdirectories that can be used by the responsible collaborator
Added a README.txt file within each directory so it will be tracked by git.

climate-cascade
|-- protocols      # Directory for protocols shared by research group
|-- scripts        # Directory for general purpose scripts and examples
|-- projects       # Directory that contains subdirectories for each individual project
|  |-- chromosomes # Directory for 'chromosomes' project
|  |  |-- data     # Directory for data specific to this project. BY DEFAULT IGNORED BY git SO WILL NOT BE TRACKED OR PUSHED TO PUBLIC REPOSITORY
|  |  |-- scripts  # Directory for scripts used for data analysis
|  |  |-- results  # Optional (and probably preferred) directory for results from 'scripts'. Preferable to have a subdirectory with results from each date or include date in YYYYMMDD format
|  |  |-- doc      # Directory for documents; methods, manuscripts, etc
|  |-- CT-max-min  # Directory for CTmax/min project

...repeat for all projects...
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