Merge pull request #1 from martinghunt/master

Initial add of files
Merge pull request #2 from martinghunt/master

fixed typos in the readme
Merge pull request #3 from martinghunt/master

fix filename in long_description
Merge pull request #4 from martinghunt/master

added method to run job directly instead of bsubbing it
Merge pull request #5 from martinghunt/master

Add script to get stats from output files. Bug fix with queue not getting set
Report all times in hours, with option to use seconds instead