Modified to use inline C; first draft
Extensively refactored and cleaned up
Now correctly working to write sample names and magnitude/xydiff
Move inline C from intensity_metrics.pl to SimFiles.pm; tidy up command line arguments
Use new SimFiles.pm with inline C
Corrected verbose on/off switch; made verbose output more informative
First draft of test updates
Add error checking on I/O operations
Force recompilation of inline C and added test on missing input
Redirect stdout from failure test
Remove unnecessary dependencies & variable
Remove unnecessary
Important bugfix, use calloc instead of malloc for magByProbe; various tidying up
Change expected checksum for magnitude, define variables for checksums