Add a number of Miriam URN bases not yet in DataSource.txt
Updated version number
Bumped the version number for Ant too
Fixed the MANIFEST.MF for the required bundles

git-svn-id: http://svn.bigcat.unimaas.nl/bridgedb/branches/1.2.x@783 e3f1d335-44b1-4163-9530-9b341189ae98
Added Oryza Indica as well as with the NCBI taxonomy terms

git-svn-id: http://svn.bigcat.unimaas.nl/bridgedb/branches/1.2.x@784 e3f1d335-44b1-4163-9530-9b341189ae98
Moved test files to test-data
Fixed where test file is found
Tests now also work in Ant
Use the replacement data source
made setup and teardown public
Added test-jar and repositories
Added created test jar
Added in commons-cli dependency
Disabled the code generation which causes a compile failure; use Ant to recreate the source code, which is found in the source code repository anyway
DataSource Registration now much Stricter.
SysCode and fullName may not be null
SysCode and fullName must be unigue. (or already paired)

Conflicts:
	org.bridgedb/src/org/bridgedb/DataSource.java
getByFullName and getBySystem code replaced with safer methods
Alernative name and description now saved to sysCode

Conflicts:
	org.bridgedb/src/org/bridgedb/DataSource.java
getUrl replaced with a safer methods
After talking to Christian, we decided that the postfix should still be returned too
Stricketer builder where appropriate

Conflicts:
	org.bridgedb/src/org/bridgedb/DataSource.java