Starting 'tagcleaner' branch
TagCleaner tools
TagCleaner tools + manual pages
tagcleaner-trim
TagCleaner tools: FASTA+QUAL parameter fixed
Added .gitignore files.
Merge branch 'master' into tagcleaner

Conflicts:
	bin/.gitignore
	src/main/admin/admin-web/build/.gitignore
Rat 5 added to bowtie, bowtie2 and BWA
tagcleaner tools
Added rat5 fasta and indexes installations.
Merge branch 'master' of https://github.com/chipster/chipster.git
Don't backup old fasta files in update-exec.sh
Merge branch 'tagcleaner'
Bad tool descriptions are skipped and warnings are shown to user.
Merge branch 'master' of https://github.com/chipster/chipster.git
fixed empty string bug when outputting SADL
build with empty string bug fixed
Tagcleaner installation.
Merge branch 'master' of https://github.com/chipster/chipster.git
Focus tool description on top when scrollbar appears