Initial commit. Added legacy schema class

DBIx for legacy stock schema
Added base class for dump data modules
Not ignoring GAF files
Legacy schema for strain-gene link
Added commands & roles for stock data export

Role for common methods to retrieve strain data
Added commands for exporting stock data
Command for dumping dicty strain data
Command to dump plasmid data
Updated cvterm role & added commons role for stock
Updated role to fetch cvterm name
Added commons role for strain & plasmid
Added export of strain characteristics

Added strain characteristics to dump
Added legacy schema for gene links & strain characteristics
Added export of pubmed & internal references

Resolving multiple references
Added handling of non-pubmed references
Better handling of references, pubmed & internal, 2 output files
Added export for plasmid inventory
Added export for strain phenotype, if not genotype or characteristic
Added stats counter for number of entries exported
Added legacy schema class & oracle transformations

Added strain-synonym legacy schema class
Added schema transformation for Oracle
Added DBP_ID generation for plasmids
Added export of genotype with unique identifier

Added DSC_G is for genotypes
Linking strain to feature through genotype
Added export of props for strains
Added export of strain phenotypes
Code cleanup, optimization, minor improvements

Optimization, cleanup, pure-SQL for phenotype
Caching strain synonyms
Optimizing phenotype query by selecting only required column
Minor fix for inconsistent spacing in description
Use pure SQL for strain-phenotypes, optimizing for speed
Minor code cleanup & misc tasks
Minor changes; docs, variables, subroutine
Added method to clean export exiting dirty plasmid sequences
Create folder if does not exist, email for eutilities
Separated creation of output files, added counting stats for export
Added retrieving of GenBank seq for plasmids

Added fetching genbank for plasmids with genbank ref
Using Bio::DB:GenBank to retrieve seq stream by accession
Moving to Export namespace

Exporting each exiting genbank to separate file - commented
Using Export namespace for stock roles
Cleanup of stock inventory export

Clean up of strain inventory export
Removing ^M from strain description
Cleanup of plasmid inventory export
Properly formatted, comma separated genotype export
Added export of strain plasmids & parents

Parental strain export
Added export of parental strain
Removed windows style line ending
Added export of strain plasmids
Converted improper GenBank seq to FastA; #64
Added export for plasmid props

Exporting plasmid props (depositor, synonym)
Added export of plasmid props (synonym, keywords, depositor)