OPS: Make the constant functions easier to use
Orthogonal Gaussian peak fitter: specify the fitter parameters

Signed-off-by: Jean-Yves Tinevez <jean-yves.tinevez@pasteur.fr>
An example of gaussian peak fitting, for M. El Beheiry

Signed-off-by: Jean-Yves Tinevez <jean-yves.tinevez@pasteur.fr>
GaussianFitTestDrive2: fix javac compile error
toArray() methods of AffineTransform2D/3D write values in row-major order.
This breaks compatibility with mpicbg's AffineModel3D but it makes
the interface consistent.
I.e., now "t1.toArray(a); t2.set(a);" does the same as "t2.set(t1);".
Update mailmap
Clean up package-info.java
Update copyrights and licenses for 2013

This was done using the commands:

    mvn license:update-project-license
    mvn license:update-file-header

This change also updates the authors list to include new authors, and
orders them according to total number of commits. (This is consistent
with before; it simply reorders everyone based on the new totals.)

Lastly, this change fixes the erroneous duplicate copyright blocks
previously present in many file headers.
Add copyright headers *before* package statement
Remove duplicate blank lines
Update licenses & copyrights for broken projects

This change also fixes some misplaced author tags.
Fix misplaced package statements

This change also removes invalid license blurbs from various files, and
cleans up a few other minor header-related issues.
Move license-maven-plugin config off the server

Previously, we stored the license configuration at:

    http://code.imagej.net/licenses

But it was a pain to keep that updated and in sync with the codebase
here. It makes more sense to use a local license resolver.

Thanks to Johannes Schindelin for the idea.
Add project.rootdir that always points to toplevel

This is a bit of a burden to maintain when projects are added or moved,
but makes it easier to point to files off the root path. Usually doing
so is a bad idea anyway, but in some cases it is nice to have access to
shared configuration, such as the files in the license folder.
Fix GPL copyright blurbs in broken projects
Allow condition's range to be configurable
Add adapter class to treat a PointSet as a RegionOfInterest

This class added for completeness. It can be eliminated if the
SciJava Roi model unites the integer/real split.
OPS: make ConditionalPointSets configurable
OPS: make PointSetRegionOfInterest::move() more functional
Provide setters/getters for some classes