fix json parsing for annotations (json arrays)
define a variable struct in common.h
Revert "updated README to reflect automake procedure"

This reverts commit dc708fcb06e0645b314a858f1bccc02ac82f4926.
Revert "dont symlink COPYING and INSTALL"

This reverts commit 6816a4d27ef8609a8851991897a3dfbf7b707074.
Revert "dont .gitignore files necessary for build"

This reverts commit 1a6f5d560f00cbcbf96e34ae69dfe26480b5d7d2.
Revert "added Makefile.in to repo"

This reverts commit d3245d52ae49ef8bdbd1f62cb0920552ea4b4a2c.
Revert "move to automake for building"

This reverts commit c92c81a64232944758f12d50ccd3e397c322eea9.

Conflicts:
	src/Makefile.am
change binary path to ./tnc
migrate to cmake
.gitignore files generated by in-path cmake build