Thesis writeup section results and discussion.
Simulation of cysteine bonding problem.


(1) Different grammars, mixtures, and window sizes
	--> tied at mixture level not state level
	--> different mixture numbers (1,3)
	--> window sizes (15,19,31)

(2) PSICOV 
	--> contact map estimation
	--> look for significant local correlation as most people only search
		for non-local correlation for beta-strands
	--> data stored on server at /gluster/data/tmb_maps.tgz