First steps with the new 0.8 release. Seems that the connector are doing something wrong when regular expression for weights or delays are given, as a function of distance. See adapted code connectors_benchmark.py for example. I'll continue to investigate

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1303 1a7b9c28-352d-0410-8541-c879d6df8dcf
 Fix the distances3D method in the space.py file, because this was not taking into account the boundary counditions. Thus, connections established were not correct, and not similar to those obtained with 0.7 as long as regular expressions were involved (checked with the connector_benchmark file). Also removed the saveConnection method from the nest wrapper, because new method are already optimized

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1304 1a7b9c28-352d-0410-8541-c879d6df8dcf
Merge pull request #1 from tclose/master

Added CloneConnector
The gather option was not working for saving connections in parallel. This is now the case, either as lists, or as arrays. The connectors_benchmark is now giving same results as with 0.7, even in the case of MPI simulations. Note that in the case of projection.get(format='arrays'), node 0 is returning the full matrices, while other nodes are just returning lists of values. This is not consistent, but more efficient in memory

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1305 1a7b9c28-352d-0410-8541-c879d6df8dcf
Documentation updates: switch from Subversion to Git, updated various URLs.
Updated README, added .gitignore

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1306 1a7b9c28-352d-0410-8541-c879d6df8dcf
Added CloneConnector class

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1307 1a7b9c28-352d-0410-8541-c879d6df8dcf
Neuron recording references cell.source_section instead of cell directly

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1308 1a7b9c28-352d-0410-8541-c879d6df8dcf
added .settings to gitignore

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1309 1a7b9c28-352d-0410-8541-c879d6df8dcf
Documentation updates: switch from Subversion to Git, updated various URLs.

git-svn-id: https://neuralensemble.org/svn/PyNN/trunk@1310 1a7b9c28-352d-0410-8541-c879d6df8dcf
Merge branch 'master' of github.com:NeuralEnsemble/PyNN following rebase from svn repository
Fixed some test failures following recent restoration of gather support for `Projection.get`
Bumped version number to 0.8alpha2
Added release notes for 0.8alpha2 and updated changelog
changed version number to 0.8dev
Made the error message when failing to load NEURON mechanisms more informative (cf #215)
Added special-case for t = 0, to avoid PyNN adding an extra time step to the simulation time (which we do to get the data at the end of the previous time step). Fixes #191 (Trac ticket:200).
Implemented `ArrayConnector`. Closes #130 (Trac ticket:139)
Added another test for `ArrayConnector`
The `set()` function now matches the `Population.set()` method, i.e. it takes one or more parameter name/value pairs as keyword arguments. Closes #69