Fix failure of test_more/limits.cpp on some systems.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2884 0e562018-b8fb-0310-a933-ecf073c7c197
Revert back to old verison of autotools because new version of does not
work on jenkins test system:
	autoconf 2.69   -> autoconf 2.68
	automake 1.13.4 -> automake 1.11.6
See:
	http://jenkins.coin-or.org:8080/job/cppad_trunk/165/console
	

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2885 0e562018-b8fb-0310-a933-ecf073c7c197
gcc_complex.sh: Fix typo.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2886 0e562018-b8fb-0310-a933-ecf073c7c197
get_sacado.sh: search for a version of cmake that is >= 2.7.
jenkins.sh: attempt to run sacado tests using new vertion of get_sacado.sh.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2887 0e562018-b8fb-0310-a933-ecf073c7c197
get_sacado.sh: another attemp to determine proper cmake version for jenkins.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2888 0e562018-b8fb-0310-a933-ecf073c7c197
jenkins.sh: initialize jenkins log and eror files as empty.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2889 0e562018-b8fb-0310-a933-ecf073c7c197
Reproduce bug in CppAD::ADFun optimizer (reported by Joao Leal).

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2890 0e562018-b8fb-0310-a933-ecf073c7c197
jenkins.sh: Postpone Sacado test until we figure out how to install trillions on coin-jenkins.
op_code.hpp: fix bug in tracing operation sequence with atomic functions.
optimize.hpp: fix bug in optimizing out atomic function arguments that are not used.
optimize.cpp: test for bug that was fixed during this commit.
optimize.sh: This test has been moved into test_more/optimize.cpp.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2891 0e562018-b8fb-0310-a933-ecf073c7c197
1. Add ADFun::check_for_nan option to allow supression of checking for nans.
2. Remove need to re-map nans in checkpoint functions.

checkpoint.hpp: optimize checkpoint function. 
fun_construct.hpp: fix typos in documentation.
reverse.hpp: add checking for nan in reverse mode results.
cond_exp.cpp: expect a nan in this example, so use check_for_nan.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2892 0e562018-b8fb-0310-a933-ecf073c7c197
Missing from previous commit.
cond_exp.cpp: supress checking for nans (expect them).

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2893 0e562018-b8fb-0310-a933-ecf073c7c197
1. Fix bug in cumulative sum operator (for forward orders greater than zero).
2. Optimize the ADFun fuction used by checkpoint.

checkpoint.hpp: fix minor errors in comments.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2894 0e562018-b8fb-0310-a933-ecf073c7c197
Fix building with autotools (using old version so works on jenkins system).
makefile.in: missing check_for_nan.cpp.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2895 0e562018-b8fb-0310-a933-ecf073c7c197
Use new "sb" (skip banner) Ipopt option.

jenkins.sh: minor cleanup and specialization to jenkins system.
solve.hpp: Fix documentation of Integer option.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2896 0e562018-b8fb-0310-a933-ecf073c7c197
1. Add a minimal atomic example called example/atomic/get_started.cpp.
2. Advance version number in source to today.

optimize.hpp: Avoid warning with signed address type (used for testing).
atomic_base.hpp: Fix documentation, only zero order forward required. 
reciprocal.cpp: fix spelling of now.
reverse.hpp: Fix bug in checking for nan during reverse mode.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2897 0e562018-b8fb-0310-a933-ecf073c7c197
Bring up to date so run with current version.

alloc_global.sh: fix check so does not fail when cannot get enough threads.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2898 0e562018-b8fb-0310-a933-ecf073c7c197
atomic_err_msg.sh: Demonstrate problem with atomic_base error messaging.
get_started.cpp: fix sero->zero.
old_reciprocal.cpp: fix sero->zero.
reciprocal.cpp: fix sero->zero.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2899 0e562018-b8fb-0310-a933-ecf073c7c197
Change atomic_base::list to atomic_base::class_object to reflect that it
is a list of all the objects in that class. 

vector.hpp: Fix documentation error (see whats_new_13 changes).

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2900 0e562018-b8fb-0310-a933-ecf073c7c197
Detect and report atomic function name when user
attempts to use an atomic function that has been deleted.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2901 0e562018-b8fb-0310-a933-ecf073c7c197
atomic_base.hpp: remove documentaiton text used in old atomic functions.
get_started.cpp: remove executable property (set by mistake).

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2902 0e562018-b8fb-0310-a933-ecf073c7c197
Add lines from atomic_base documentation to corresponding examples.

package.sh: ignore the bug/build directory.

git-svn-id: https://projects.coin-or.org/svn/CppAD/trunk@2903 0e562018-b8fb-0310-a933-ecf073c7c197