Removed Blah::Module
Merge branch 'master' of github.com:mptrsen/Orthograph
Merge branch 'master' of github.com:mptrsen/Orthograph
Merge branch 'master' of github.com:mptrsen/Orthograph
Merge branch 'master' of github.com:mptrsen/Orthograph
Making the Exonerate module work
Updated README, cleaned up code a little
Merge branch 'master' of github.com:mptrsen/Orthograph

Conflicts:
	orthograph-analyzer