Release log update
Encode release log update
Found one more place where a resetMergeState was necessary.
Without the reset, large-bin items from the previous chrom could
still be hanging out in bigItemQueue when we query the next chrom.
adding a qascript-wide variable to these two qaConfig files for the location of the genank TABLE STATUS dump files. Sometimes they are located on rrnfs1 and sometimes on hgnfs1. This will keep it all in one place. I will also edit all of the qascript files that look for those dumpfiles to use this variable instead.
Changing trackDb.ra to remove dgv from hg18 and hg19, adding entry in hg17/trackDb.ra to preserve on hg17, for dgvPlus hg17/hg19 release refs # 11200
Added ClinVar Variants tables to hg19 tablesIgnored (redmine #10956)
Merge branch 'master' of hgwdev.sdsc.edu:/data/git/kent
fiddle with assembly priority again
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent
I think this will work better with a quoted string
Edited short/long labels for uniformity and space considerations (redmine #10956)
replacing the hard-coded location of the genbank TABLE STATUS dump files to the global qaConfig-defined one. Sometimes they are on rrnfs1 and sometimes they are on hgnfs1
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent
qTail->start should be compared to region end only when it's on the same chrom.
Calling asdDoQueryChunking from way down in nextRowFromBuffer wasn't
a good idea because nextRowFromBuffer might have a caller that assumes
we're done merging... but after calling asdDoQueryChunking, we need
to start over with the merging.  So, return NULL, but set self->needQuery;
then, way up in asdNextRow, if we get a NULL, then check self->needQuery,
and try again if necessary.
removed 2 nonexistent rr machines
Per Max, removed NCBI from the track long labels (redmine #10956)
switching hard-coded nfs1 fileserver name for qaConfig variable
switching hard-coded nfs1 fileserver name for qaConfig variable
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent