Merge pull request #559 from qidane/correct-release

Complete revert of Image->Transform
Merge pull request #561 from qidane/5-docs-2013-06

Update Bio-Formats 5 docs to 2013-06
Merge pull request #548 from melissalinkert/seq-suffix

SEQ: do not automatically pick up files with the .seq suffix
CZI: parse timestamp attachments

See http://lists.openmicroscopy.org.uk/pipermail/ome-users/2013-June/003794.html
merge develop -D org -I include -E exclude: PR 528 (Tile performance improvements for VMS and NDPI)
merge develop -D org -I include -E exclude: PR 529 (Still more bug fixes)
merge develop -D org -I include -E exclude: PR 556 (Add ``mkfake`` tool)
merge develop -D org -I include -E exclude: PR 562 (Zeiss CZI improvements)