Fixed bug in Makefile:check on non-Ubuntu systems due to non-sequential make behavior
(cherry picked from commit 792ffff8e25ce17b47c58f9ad7544f78b4ada3e9)

Signed-off-by: Andreas Neiser <neiser@kph.uni-mainz.de>
Improve acqu_core/.gitignore
(cherry picked from commit 117b72b44294b65c06fb191418735cc05fb93cd0)

Signed-off-by: Andreas Neiser <neiser@kph.uni-mainz.de>
Started basic doxygen setup
	modified:   .gitignore
	new file:   Doxyfile
	new file:   doc/logo.png
Added QtCreator files for acqu_core, at least file jumping works
Added custom QtCreator file for compilation
Add TRB3.dat config for AcquDAQ (does not work at the moment)
Add Run options for QtCreator
Working TRB3.dat version, how to start the Acquisition now?
Enable debug mode in QtCreator, AcquDAQ seems to work now
Add start script which properly sets environment
Store test data in gitignored scratch directory
Adding analysis config files from a2kallisti:/home/a2cb/AcquRoot/AlphaBetaMay2013/data (does not work yet)
AcquRoot can now be debugged as well
Analysis config files to QtCreator project
Moved AcquRoot config to more appropiate directory
Debugging works better without optimizations...
Use same scratch directory for AcquDAQ and AcquROOT
Flush log file writing after every message
Now AcquRoot only segfaults quite late. Still debugging needed.
Commented out many things in Analysis, now AcquRoot does not segfault
(which was again due to reference to a config *.dat file which never existed)