Updated change log
Added docs to test transfer table and included it in test group. Added title to gpl header.
started basic coding
Split the second fixed config up, reorganised things between the two blocks, added all fixed blocks to the lookup so every single setting can now be tuned from outside. Various had coded stuff should be moved to these locations to aid in testing.
Added brief descriptions and new header to linker scripts. Formatted links in all three linker script components.
Fix @file references
Added doxygenation to utils and injection isrs.
Documented the main function and its source file.
Documented miscISRs.c and all interrupt handlers contained within.
Documented the real time isr file and each isr within it.
getting more of the logic in place
Update template files to have new header and .c template to include a single template function documenation block.
doxygen -u Doxyfile to 1.5.8  update config
Documented all functions properly, this could contain some mistakes, feel free to offer corrections :-)
Update gpl comment with header.
Add explanation for static init file in doxy comment.
Updated logic, still a ways away from compiling, but it should be ebough for fellow dev's to comment on
updated flash init to follow block diagram as described in manual for greater portability
updated flash init to follow block diagram as described in manual for greater portability
Last of the source documentation for now :-)