now setting custom user file name correctly

git-svn-id: file:///home/svn-repositories/biojava/biojava-live/trunk@10007 7c6358e6-4a41-0410-a743-a5b2a554c398
now setting custom user file name correctly

git-svn-id: file:///home/svn-repositories/biojava/biojava-live/trunk@10008 7c6358e6-4a41-0410-a743-a5b2a554c398