Merge pull request #1 from spond/master

Updating to sergei's latest tweaks
Merge pull request #2 from spond/master

setup.py to include TNS
Update README.md
Update README.md
Adding Sergei's Q3 commits
Merge pull request #3 from stevenweaver/master

Sergei's Q3 fixes, Filter Option, and self.adjacency_list conditional fix.
Merge pull request #4 from veg/master

Merging veg back in
Added an implementation of the triangle filtering option based on conditional independence testing
Merge pull request #4 from spond/master

Added phylogenetic triangle filtering
Refactored edge removal into network construction; 'remove' option now simply removes all the unsupported edges
Add networkbuild.py to setup
Output sequence IDs in JSON edge descriptions
Merge pull request #5 from spond/master

Refactored edge removal into network construction; 'remove' option now s...
Update README.md
Merge pull request #6 from spond/master

Add networkbuild.py to setup
Improved (and correct) algorithm for triangle counting; parallelized triangle filtering tasks; triangles are now sorted by edge overlap so as to maximize edge removal; refactored networkbuild a bit
Merge pull request #5 from veg/master

Updated README
Merge pull request #7 from spond/master

Merge network filtering updates and improvments