Merge pull request #319 from adrienkaiser/update-DTIAtlasBuilder

ENH: Add new names/folder handling + COMP: fix BatchMake compilation
Adds the interactive PDF Segmenter, and more.
Merge pull request #320 from chrismullins/update-TubeTK

Adds the interactive PDF Segmenter, and more.
BUG: fix Testing with python on linux and pop ups on mac/win