Vagrant fixes

This commit introduces a couple of Vagrant fixes:
 * Added a shell script that installs some necessary tools
 * Updated various packages their version for the local environment
 * Using a package for all the fonts
 * Added a custom vagrant install for Hilary and 3akai-ux
Merged master in vagrantFixUp.
Vagrant PR cleanup
Added README about oracle JDK.
Added vagrant halt note.
Cleaned up readme and .gitignore file.
Vagrant: Update README + init script
Putting cd statement back in vagrant init script.
Added link to Vagrant homepage