To run several commands, one should just append newlines and ignore jt.args
Completely revamped sample_delivery_note.py to use ProjectSummary as basal information source
Merge branch 'master' of github.com:SciLifeLab/scilifelab
Merge branch 'master' of github.com:SciLifeLab/scilifelab
Add more tests for transferring from casava to casava
Make flowcell handle details in run_info
Add transfer_dir option
Improved test data generation. Sort files in yaml output
Add file types to collect files
Add test for from casava to casava delivery
Merge branch 'develop' of github.com:percyfal/scilifelab into feature/pm
Add analysis files
Add rm function for projects. Add tests for rm function
Add query_yes_no to rm function
Add force to query_yes_no functions in test
Add verbose mode. Update recursive directory removal
Add exclude_dirs and include_dirs to filtered_walk
Add function purge_alignments to remove superfluous alignment files
Add safe_write function
Remove safe_write since write already present