Move mpu.h to the correct location.

This header shouldn't have been located in the main Smoothie src tree
but in the build specific portion of the tree.  I think it got placed
in the incorrect location during my major merge just before pushing the
new build system into the edge branch.
Restructure mbed SDK makefiles.

No longer deploy common headers to drop subdirectory from the device
specific makefiles.  This caused contention during some parallel build
runs.  Now the common headers are deployed to drop from the main
makefile in the mbed/src directory.  This should not only remove the
parallel build race condition but even improve the performance of
since the common header deployment can now occur in parallel with
the device specific builds.