Annotations / Add genomic locations to data: fixed sort order and changed a column name from 'chr' to 'chromosome' to make compatible with other scripts.
Merge remote-tracking branch 'upstream/master'
Genomebrowser data production added to genome index management scripts.
Version to 2.8.2
BAM input for FastQC
- Visualize bed score and color
- Selection support for bed, vcf and cna files
- High resolution image export
PCA modified to produce variance explanation tables
Merge branch 'master' of https://github.com/chipster/chipster.git
Ordination-pca script modified
PCA manual updated
Don't lose trailing empty columns when there are more than one of them.
Merge branch 'master' of https://github.com/chipster/chipster.git
Register gene search to listen data after the data listeners are
updated.
merge-pheno-and-data.R function created and bugs in delete column fixed.
Merge branch 'master' of https://github.com/chipster/chipster.git
merge-pheno-and-data fixed to make unique row names
output fix for all BEDtools tools
Add tsv support to genome browser and a sort tool.
Merge tool editor war
Genome administration tools updated
TopHat tests