Rename of ALG folder to Algorithms
Rename of GEN folder to Generators
Rename of folder BAS to Base
Rename of folder NET to Network
Rename folder VIS to Visualization
Update of code to reflect renaming of folders.  I searched in all files, so hopefully didn't miss any.  My run_script works, so I got most at least.
More deletions/renames
Merge branch 'develop' into feature/CustomGenerator