You'd better explain it here. That if anyone else have the same problem, they will get answered also.


Best Regards.

Jianfeng Jia
PhD student of Computer Science
University of California, Irvine

On Nov 22, 2013, at 10:38 AM, Nan-Zhang <notifications@github.com> wrote:

> In genomix/genomix-data/src/main/java/edu/uci/ics/genomix/type/Node.java:
> 
> >                  }
> >              }
> >              if (other.flippedReadIds != null) {
> >                  for (ReadHeadInfo p : other.flippedReadIds) {
> >                      getFlippedReadIds().add(p.getMateId(), p.getReadId(),
> > -                            (int) ((p.getOffset() + 1) * lengthFactor - lengthFactor));
> > +                            (int) ((p.getOffset() + 1) * lengthFactor - lengthFactor), p.getThisReadSequence(), p.getMateReadSequence());
> @JavierJia I can explain to you face to face.
> 
> —
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>