Merge branch 'master' into develop
API docs, more docs
ASCII art
Clean up docs
new doc font fall back, read manual region docs
Hotfix - coverage calc bug
doc clean up
tx/genes can persist cov annotations, autopilot automates this
Bug: completeness transcript calc
Sketch of SQL query for global averages etc.
Convert str->int --cutoff (docopt). Fixes #3
Merge branch 'feature/tx-persist-coverage' into develop
bug in chanjo test
Merge branch 'develop'