Tests automatically run by nosetests command
Test for SampleSetting class
Tests for contig generation functions
Using the new read_parsed_taxonomy_file function
Read parsed taxonomy file, function
Shrinked parsed_gen file
read_FASTA_file function in contig_generation
Finished for today
Setup and teardown for tests
Sketch functions for generating group contigs and printing
count_per_g can accept group parameter
Test class renamed to Experiment
count_per_g works, with test
Tests for multinomial in class
SampleGroup class in corrbin.contig_generation
Going home for today, continue testing print contigs tomorrow
Corrbin.contig_generation can print to fasta file
Generate contigs program works for test data
Fixed problem where wrong fasta file was used, now use the one marked 'complete genome' in that case
Removed unnecessary calculation