Removed some stuff no longer in use.
Fixed a problem in finding external executables. Renamed function findInSystemPath to findOnSystem. Fixed some import statements to be fully qualified as SAP.Bio...
Removed some code that was commented out. Fixed Pairwisediffs. Took care of some crossplatform issues for clustalw system calls.
Changed some option defaults from False to None. Updated uptions on GUI.
Fixed a few things related to installation of dependencies.
Fixed some problems with GUI installation of blastcl3.
Fixing dependency installation of clustalw2
Fixing more issues with installation of clustalw2
Worked on clustalw2 installation on linux
Some more dependency installation fixes
Tried to make the GUI work. Down to the extensions not working
Fixed some typos/bugs
Made taxon names show as italic in svg
Added a viewresults option and add some code for captureing and printing tracebacks
Added a viewresults option
Fixed the way plugins are imported in the GUI
Fixed the C++ extensions to they work with the threads in the GUI
Added import statements for plugins so py2app can map them as dependencies.
Minor fixes
Added winpostinstall.py