Change to best practice on Makefile design
Moving makefile to top level dir
Add the CAE build script to version control as a starting point.
Adding some notes on RayHistory
Add a single simple sample for DAG-MCNP5
Add options for location of Cubit and for location of now-publicly available dagmc source.
Merge pull request #114 from svalinn/add_build_script

Add the CAE build script to version control as a starting point.
Merge pull request #115 from svalinn/new_doc_file

Adding some notes on RayHistory
Merge pull request #116 from svalinn/add_sample

Add a single simple sample for DAG-MCNP5
Adding some quotes for better handling of unset variables
Remove extraneous reference to CGM repo
Add contrib scripts.

In addition to creating a new directory for contributing scripts, a
first contribution is included.

`finish_dagmc_geom.bash` performs imprint/merge/graveyard on a
well-formed geometry and is described in the READEM.md file.
Move contrib scripts since this first one is probably applicable to all physics.
Merge pull request #118 from svalinn/build_script_fix01

Build script fix01
Merge pull request #119 from svalinn/add_first_contrib_scripts

Add first contrib scripts
Change MOAB to git repo
Merge pull request #120 from zwelchWI/master

Update build_dagmc_stack.sh for Git repo
Update build script to pull DAGMC from repo and patch with that.  Tested with v5.1.60
Merge pull request #123 from svalinn/build_script_update

Update build script to pull DAGMC from repo and patch with that.
modifed to fix the linking problem across different systems