Bootstrapping after a resting period

- Cleans and fixes up the ``rhaptos2.repo`` project after having a rested for some time while work happened on other projects.
- Fixes the database connection procedure. (Honestly, I don't know how it was done before, so I may not have fixed it.)
- Brings the project up to speed with the changes to ``atc``, which are significantly broken prior to these changes due to directory and file structure changes.
- Pushes the web serving bits out of the application into a supporting ``PasteDeploy`` configuration found in the ``paster-development.ini`` file. This was previously known as 'devmode' or 'stand-alone' web server.
- Moves the the the index view from ``/js/`` to ``/`` and the temporary authentication bootstrapping page to ``/bootstrap``.
- Revises the REAME to a similar structure as that used in ``cnx-archive``. The installation instructions try to grapple  the dependency descriptions first and make the processes as clear and transparent (removal of ``quickdownload.sh``) as possible.
- Adjusts the logging to put the log file in the current-working-directory rather than a fixed path that may or may not exist on some systems.