issue2405: Adding jsb_deprecated.js for the compatibility of deprecated variables and methods.
issue #2405: Removing deprecated methods in 'skip' section in cocos2dx.ini since bindings-generator will not bind deprecated methods now.
closed #2405: Updating bindings-generator, Bindings-generator should not bind deprecated methods.
Updating jsb_deprecated.js.
Merge pull request #3158 from dumganhar/deprecated-func

closed 2405: Updating bindings-generator, bindings-generator should not bind deprecated methods.