Merge pull request #231 from jaredbischof/develop

Renaming stats_info and error_log files in inbox if sequence file gets renamed.
added check for 'viewable' status of jobs - otherwise api breaks or returns bad data
matrix for dumping to file
child thread now behaves
Merge pull request #232 from teharrison/develop

api fixes / additions
fixed star rights with matrix
command line script for biom dump
Merge pull request #233 from teharrison/develop

api matrix star rights was broken
Fixed call to retrieve md5s for a given job and function.